deprecated unused classes

n2s3/src/main/scala/fr/univ_lille/cristal/emeraude/n2s3/features/builder/NeuronIterable.scala

@@ -6,6 +6,7 @@ import fr.univ_lille.cristal.emeraude.n2s3.features.io.input.Shape
 /**
   * Created by falezp on 23/05/16.
   */
+@deprecated("Use the correct Neuron and NeuronGroup refs instead", "4/8/2016")
 abstract class NeuronIterable extends Traversable[NetworkEntityPath] {
   val shape : Shape
   def dimensionNumber = shape.dimensionNumber
@@ -16,19 +17,8 @@ abstract class NeuronIterable extends Traversable[NetworkEntityPath] {
   def apply(index : Int*) = get(index)
 }
 
-abstract class LinearNeuronIterable(neurons : Seq[NetworkEntityPath]) extends NeuronIterable {
-  val shape : Shape = Shape(neurons.size)
-  def get(index :  Seq[Int]) : NetworkEntityPath = {
-    assert(index.size == 1)
-    neurons(index.head)
-  }
-
-  def getDimension(index : Int*) : NeuronIterable = throw new UnsupportedOperationException
-
-  def firstDimension : Seq[NeuronIterable] = throw new UnsupportedOperationException
-}
-
-case class ShapedNeuronIterable(neurons : Seq[NetworkEntityPath], val shape : Shape) extends NeuronIterable {
+@deprecated("Use the correct Neuron and NeuronGroup refs instead", "4/8/2016")
+case class ShapedNeuronIterable(neurons : Seq[NetworkEntityPath], shape : Shape) extends NeuronIterable {
 
   assert(this.shape.product == neurons.size)
 

n2s3/src/main/scala/fr/univ_lille/cristal/emeraude/n2s3/features/builder/NeuronLayer.scala

@@ -6,10 +6,11 @@ import fr.univ_lille.cristal.emeraude.n2s3.features.io.input.Shape
 import fr.univ_lille.cristal.emeraude.n2s3.features.learning.{BackPropagationMethod, DefaultBackPropagationMethod}
 
 import scala.collection.mutable
+
 /**
   * Created by falezp on 23/05/16.
   */
-
+@deprecated("Use the correct Neuron and NeuronGroup refs instead", "4/8/2016")
 class NeuronLayer(container : Option[NetworkEntityPath], neurons : Seq[NetworkEntityPath], shape : Shape) extends ShapedNeuronIterable(neurons, shape) {
 
   var backPropagationMethod : BackPropagationMethod = _