correcting README and config.

README.md

@@ -44,7 +44,7 @@ You can set it up by running the following commands:
 
 ```bash
 mamba env create -f dependencies.yml
-conda activate RNA-tailor
+conda activate RNA-tailor-env
 ```
 
 Some packages may be incompatible between each other in a conda environment, to address this issue install them globally :

config.json

@@ -12,21 +12,12 @@
 	"REGROUP_GLOBALVECTOR_VALUE" : 6,
 	"SOLID_JUNCTION_MINIMUM" : 2 ,
 	"PERCENT" : 0.05,
-	"DBREADS_mus" : "BYK_CB_ONT_1_FAF04998_A_1Donly",
-	"DBREADS" : "24_05_Tandem_alternative_splice_site_1_per_gene_distributed",
-	"DBREADS_est" :"ONT_simulated_aligned_reads_CHR3",
-	"DBREADS_sim" : "10_01_whole_freddie_genes",
-	"DBREADS_droso" : "drosophila_melanogaster_simulated",
-	"DBREADS1" : "14_02_custom_modif",
-	"DBREADS2" : "14_02_custom_modif2",
-	"DBREADS_homo" : "perfect_read_non_modifie",
-	"DBREADS_unmodified" : "5_02_freddie_human_genes_400",
+	"DBREADS" : "example",
 	"Threads_minimap2" : 13,
 	"genome" : true,
 	"READCOVER_THRESHOLD" : 50,
 	"GENECOVER_THRESHOLD" : 0,
-	"SPECIE_droso" : "drosophila_melanogaster",
-	"SPECIE" : "homo_sapiens",
+	"SPECIE" : "mus_musculus",
 	"REALIGNMENT" : true,
 	"REDEMPTION" : true,
 	"ISOFORM_READ_SUPPORT" : 1